Okay I try:
-Set valid flightplan using Simbrief
-spawn at a gate without jetway
-connect stairs via GSX
-load flightplan into Fenix EFB
-call fuel truck
-when fuel truck is ready load the aircraft using Fenix EFB
-as soon as refueling is completed, request boarding
-select "nobody"
->PAX arrive most of the time in the crew bus
I followed this as closely as possibly, my Simbrief plan was for 137 passengers and, according to your setting of "multiple trips" disabled, they arrived all together in a single large bus.
I don't see anything wrong in your setting, the only one you should probably disable is the detect_custom_refuel option, which automatically calls the Fuel truck as soon the airplane increases its fuel quantity, but it's only useful when the airplane has a simulation of a turnaround procedure and would start refueling itself after a while, but as far as I know, no MSFS airplane requires it, it was mainly used for the PMDG 777 in P3D.